A comprehensive database of high-quality metazoan proteomes generated in a robust and consistent fashion from SRA data. The database includes information on predicted proteins and protein domains and the ability to perform sequence similarity searches against all proteomes generated using this pipeline.
A manually-curated database of all conditions with known genetic causes, focusing on the utility of genetic/genomic diagnosis and the availability of disease-specific interventions.
Access to sequence data and related information on Hydra, a valuable experimental model for the study of numerous biological processes, including regeneration, senescence, axial patterning, cell signaling, and development.
Access to the newly sequenced chromosome-level assembly and related data on the AEP-strain of Hydra vulgaris, a valuable experimental model for the study of fundamental biological principles including patterning, stem cell biology, aging and regeneration.
Access to sequence data and related information on Hydractinia, a model system for the study of fundamental biological processes such as regeneration, allorecognition, and stem cell biology.
Information for researchers and dog owners interested in finding the genetic basis of morphologic traits, behaviors, or diseases in the domestic dog in order to improve the health and well being of dogs and their human companions.
A database containing confirmed mutations to inherited disorders of the erythrocyte membrane associated with hemolytic anemia including Hereditary Spherocytosis (HS), Hereditary Elliptocytosis (HE), and Hereditary Pyropoikilocytosis (HPP).
A collection of four independent, yet interrelated, command line programs that facilitate each step in the workflow of sequence discovery, curation, alignment, and phylogenetic reconstruction.
A computational algorithm that is designed to theoretically calculate the effect of substituting an amino acid relative to the reference sequence within functional modules - the protein domains.
Entanglement mapping (EM) is a new Random Forests based method for detecting interactions between important features, such as epistatic interactions between SNPs in genome-wide association studies.
A software framework for selecting a set of genetic predictors which jointly and independently explain trait variation with an additive regression model.
A tool that rapidly maps sequence tags to RefSeq, UniGene, and genomic sequences, providing output amenable to both transcript quantification and the detection of novel transcripts.
VarSifter is a graphical java program designed to display, sort, filter, and generally sift variation data from massively parallel sequencing experiments.